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{"id":"skills-2xo","title":"Add README.md for web-search skill","description":"web-search skill has SKILL.md and scripts but no README.md. AGENTS.md says README.md is for humans, contains installation instructions, usage examples, prerequisites.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:14.26066025-08:00","updated_at":"2025-12-28T22:37:48.324822157-05:00","closed_at":"2025-12-28T22:37:48.324822157-05:00","close_reason":"Added README.md with prerequisites, usage examples, and cross-references","dependencies":[{"issue_id":"skills-2xo","depends_on_id":"skills-vb5","type":"blocks","created_at":"2025-11-30T12:01:30.240439018-08:00","created_by":"daemon","metadata":"{}"}]}
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{"id":"skills-39g","title":"RFC: .skills manifest pattern for per-repo skill deployment","description":"Document the .skills file pattern where projects declare skills in a manifest, .envrc reads it, and agents can query/edit it.","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-30T12:37:50.106992381-08:00","updated_at":"2025-11-30T12:43:04.155161727-08:00","closed_at":"2025-11-30T12:43:04.155161727-08:00"}
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{"id":"skills-3em","title":"Prototype elevation pipeline","description":"Build pipeline: successful molecule → skill draft\n1. On molecule close, option to 'elevate'\n2. Analyze squashed trace\n3. Extract generalizable pattern\n4. Generate SKILL.md draft\n5. Human approval gate\n\nStart simple: script that takes squashed molecule ID and outputs draft SKILL.md\n\nMigrated from dotfiles-2p2.","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-23T19:21:08.208885336-05:00","updated_at":"2025-12-29T13:55:35.80560789-05:00","closed_at":"2025-12-29T13:55:35.80560789-05:00","close_reason":"Parked with ADR-001: skills-molecules integration deferred. Current simpler approach (skills as standalone) works well. Revisit when complex orchestration needed.","dependencies":[{"issue_id":"skills-3em","depends_on_id":"skills-jeb","type":"blocks","created_at":"2025-12-23T19:21:50.034640219-05:00","created_by":"dan"},{"issue_id":"skills-3em","depends_on_id":"skills-2k0","type":"blocks","created_at":"2025-12-23T19:50:10.516122892-05:00","created_by":"daemon"}]}
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{"id":"skills-3gk","title":"Research: Cross-agent hook alternatives","description":"Claude Code has hooks (Stop, SessionStart, etc.) for mechanical enforcement. Other agents don't.\n\nResearch alternatives for cross-agent quality gates:\n\n1. **External wrapper** - Script that launches agent, monitors output, gates exit\n2. **Protocol-based** - Agent follows instructions in AGENTS.md, posts to state store\n3. **Orchestrator pattern** - Meta-agent spawns worker + reviewer, enforces gate\n4. **Hybrid** - Hooks where available, protocol elsewhere\n\nEvaluate:\n- Enforcement strength (mechanical vs cooperative)\n- Implementation complexity\n- Agent compatibility\n- Failure modes\n\nOutput: Comparison doc with recommendation","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-09T17:14:20.433319252-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:20.433319252-08:00"}
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{"id":"skills-3ja","title":"Design: Cross-agent quality gate architecture","description":"Design a quality gate pattern that works regardless of agent.\n\nRequirements:\n- Worker agent can be Claude, Gemini, OpenCode, etc.\n- Reviewer agent can be any capable model\n- Gate blocks completion until reviewer approves\n- Circuit breakers prevent infinite loops\n- Works in autonomous/unattended scenarios\n\nBuilding on alice/idle research (docs/research/idle-alice-quality-gate.md):\n- alice uses Claude hooks + jwz state\n- We need agent-agnostic equivalent\n\nConsiderations:\n- State management: jwz vs beads vs simple files\n- Enforcement: mechanical vs protocol-based\n- Reviewer selection: orch consensus vs single model\n- Activation: opt-in prefix vs context-based\n\nOutput: Architecture doc with component design","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-09T17:14:20.657906484-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:20.657906484-08:00"}
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{"id":"skills-3o7","title":"Fix ai-skills.nix missing sha256 hash","description":"modules/ai-skills.nix:16 has empty sha256 placeholder for opencode-skills npm package. Either get actual hash or remove/comment out the incomplete fetchFromNpm approach.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-30T11:58:24.404929863-08:00","updated_at":"2025-11-30T12:12:39.372107348-08:00","closed_at":"2025-11-30T12:12:39.372107348-08:00"}
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{"id":"skills-4pw","title":"spec-review: Expand NFR checklist in prompts","description":"Current prompts mention 'performance, security, accessibility' but miss many critical NFRs.\n\nExpand to include:\n- Security (authn/authz, secrets, threat model)\n- Privacy/compliance (GDPR, PII)\n- Observability (logging, metrics, tracing)\n- Reliability (SLOs, failure modes)\n- Rollout/rollback strategy\n- Migration/backfill\n- Data retention/lifecycle\n- Cost constraints","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-15T00:23:24.485420922-08:00","updated_at":"2025-12-15T14:03:46.508452685-08:00","closed_at":"2025-12-15T14:03:46.508452685-08:00"}
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{"id":"skills-4u0","title":"Skills + Molecules Integration","description":"Integrate skills system with beads molecules.\n\nKey concepts from consensus brainstorm:\n1. Skills = procedural knowledge (HOW), Molecules = work tracking (WHAT)\n2. Link via skill: field in molecule nodes\n3. Wisps as execution traces for debugging/replay\n4. Elevation pipeline: successful molecule → auto-generate skill draft\n5. Skills as transition middleware (on_enter/on_exit hooks)\n\nImplementation phases:\n- Phase 1: Document findings (ADR)\n- Phase 2: Wisp execution trace format\n- Phase 3: Elevation pipeline prototype\n- Phase 4: Test on real skill (worklog)\n\nMigrated from dotfiles-jjb.","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-23T19:20:19.818455543-05:00","updated_at":"2025-12-29T13:55:35.782406912-05:00","closed_at":"2025-12-29T13:55:35.782406912-05:00","close_reason":"Parked with ADR-001: skills-molecules integration deferred. Current simpler approach (skills as standalone) works well. Revisit when complex orchestration needed.","dependencies":[{"issue_id":"skills-4u0","depends_on_id":"skills-rex","type":"blocks","created_at":"2025-12-23T19:22:10.725578029-05:00","created_by":"dan"},{"issue_id":"skills-4u0","depends_on_id":"skills-vpy","type":"blocks","created_at":"2025-12-23T19:23:18.166650023-05:00","created_by":"dan"},{"issue_id":"skills-4u0","depends_on_id":"skills-u3d","type":"blocks","created_at":"2025-12-23T19:23:28.59360697-05:00","created_by":"dan"}]}
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{"id":"skills-5vg","title":"spec-review: Add context/assumptions step to prompts","description":"Reviews can become speculative without establishing context first.\n\nAdd to prompts:\n- List assumptions being made\n- Distinguish: missing from doc vs implied vs out of scope\n- Ask clarifying questions if critical context missing","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-15T00:23:25.681448596-08:00","updated_at":"2025-12-15T14:06:15.415750911-08:00","closed_at":"2025-12-15T14:06:15.415750911-08:00"}
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{"id":"skills-6ae","title":"Create ui-query skill for AT-SPI integration","description":"Create a skill that provides programmatic UI tree access via AT-SPI.\n\n## Context\nAT-SPI is now enabled in dotfiles (services.gnome.at-spi2-core + QT_LINUX_ACCESSIBILITY_ALWAYS_ON).\nThis complements niri-window-capture (visual) with semantic UI data.\n\n## Capabilities\n- Read text from GTK/Qt widgets directly (no OCR)\n- Find UI elements by role (button, text-field, menu)\n- Query element states (focused, enabled, checked)\n- Get element positions for potential input simulation\n- Navigate parent/child relationships\n\n## Suggested structure\nskills/ui-query/\n├── SKILL.md\n├── scripts/\n│ ├── list-windows.py # Windows with AT-SPI info\n│ ├── get-text.py # Extract text from window/element\n│ ├── find-element.py # Find by role/name\n│ └── query-state.py # Element states\n└── README.md\n\n## Notes\n- Start simple: list windows, get text\n- pyatspi available via python3Packages.pyatspi\n- Use accerciser (now installed) to explore the tree","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-29T15:37:55.592793763-05:00","created_by":"dan","updated_at":"2025-12-29T15:37:55.592793763-05:00"}
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{"id":"skills-6e3","title":"Searchable Claude Code conversation history","description":"## Context\nClaude Code persists full conversations in `~/.claude/projects/\u003cproject\u003e/\u003cuuid\u003e.jsonl`. This is complete but not searchable - can't easily find \"that session where we solved X\".\n\n## Goal\nMake conversation history searchable without requiring manual worklogs.\n\n## Approach\n\n### Index structure\n```\n~/.claude/projects/\u003cproject\u003e/\n \u003cuuid\u003e.jsonl # raw conversation (existing)\n index.jsonl # session metadata + summaries (new)\n```\n\n### Index entry format\n```json\n{\n \"uuid\": \"f9a4c161-...\",\n \"date\": \"2025-12-17\",\n \"project\": \"/home/dan/proj/skills\",\n \"summary\": \"Explored Wayland desktop automation, AT-SPI investigation, vision model benchmark\",\n \"keywords\": [\"wayland\", \"niri\", \"at-spi\", \"automation\", \"seeing-problem\"],\n \"commits\": [\"906f2bc\", \"0b97155\"],\n \"duration_minutes\": 90,\n \"message_count\": 409\n}\n```\n\n### Features needed\n1. **Index builder** - Parse JSONL, extract/generate summary + keywords\n2. **Search CLI** - `claude-search \"AT-SPI wayland\"` → matching sessions\n3. **Auto-index hook** - Update index on session end or compaction\n\n## Questions\n- Generate summaries via AI or extract heuristically?\n- Index per-project or global?\n- How to handle very long sessions (multiple topics)?\n\n## Value\n- Find past solutions without remembering dates\n- Model reflection: include relevant past sessions in context\n- Replace manual worklogs with auto-generated metadata","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-17T15:56:50.913766392-08:00","updated_at":"2025-12-29T18:35:56.530154004-05:00","closed_at":"2025-12-29T18:35:56.530154004-05:00","close_reason":"Prototype complete: bin/claude-search indexes 122 sessions, searches by keyword. Future: auto-index hook, full-text search, keyword extraction."}
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{"id":"skills-6fu","title":"Research: State management for cross-agent workflows","description":"Evaluate state management options for cross-agent coordination.\n\nOptions:\n1. **jwz** - emes tool, append-only JSONL, git-mergeable, Zig\n2. **beads** - Our tool, graph-based issues, Rust\n3. **Simple files** - JSON/JSONL in .state/ directory\n4. **Environment variables** - Ephemeral session state\n\nCriteria:\n- Cross-agent access (all can read/write via CLI)\n- Git compatibility (mergeable, not conflicting)\n- Persistence (session vs permanent)\n- Query capability (search, filter)\n- Complexity (dependencies, setup)\n\nContext:\n- beads for persistent issues/work\n- jwz for transient session coordination\n- May need both for different purposes\n\nOutput: Recommendation on state management strategy","status":"open","priority":3,"issue_type":"task","created_at":"2026-01-09T17:14:20.971160754-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:20.971160754-08:00"}
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{"id":"skills-6gw","title":"Add artifact provenance to traces","description":"Current: files_created lists paths only.\nProblem: Can't detect regressions or validate outputs.\n\nAdd:\n- Content hash (sha256)\n- File size\n- For modifications: git_diff_summary (files changed, line counts)\n\nExample:\n outputs:\n artifacts:\n - path: docs/worklogs/...\n sha256: abc123...\n size: 1234\n action: created|modified\n\nEnables: diff traces, regression testing, validation.","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-23T19:49:48.654952533-05:00","updated_at":"2025-12-29T13:55:35.827778174-05:00","closed_at":"2025-12-29T13:55:35.827778174-05:00","close_reason":"Parked with ADR-001: skills-molecules integration deferred. Current simpler approach (skills as standalone) works well. Revisit when complex orchestration needed."}
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{"id":"skills-6jw","title":"spec-review: Add severity labeling to prompts and reviews","description":"Reviews produce flat lists mixing blockers with minor nits. Hard to make decisions.\n\nAdd to prompts:\n- Require severity labels: Blocker / High / Medium / Low\n- Sort output by severity\n- Include impact and likelihood for each issue","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-15T00:23:23.334156366-08:00","updated_at":"2025-12-15T13:00:32.678573181-08:00","closed_at":"2025-12-15T13:00:32.678573181-08:00"}
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{"id":"skills-6x1","title":"Epic: emes plugin architecture alignment","description":"Convert skills to emes-style plugin architecture for portability across Claude Code, Gemini, and VPS deployment (ops-jrz1).\n\n**emes tools (evil-mind-evil-sword org):**\n- tissue: Git-native issue tracking (machine-first)\n- idle: Quality gate (blocks exit until reviewer approves)\n- jwz: Async messaging with identity/git context\n- marketplace: Plugin distribution registry\n\n**Conversion work:**\n1. Add .claude-plugin/plugin.json to each skill\n2. Restructure: SKILL.md → skills/\u003cname\u003e.md (auto-discovery)\n3. Add hooks/ where applicable (quality gates)\n4. Create marketplace.json registry\n5. Test with ops-jrz1 deployment\n\n**Key principles from emes:**\n- Pull context on-demand (not big upfront injections)\n- Mechanical enforcement via hooks (not prompts)\n- References over inline content\n- Machine-first interfaces (JSON output)\n\n**Candidates for conversion:**\n- orch (simple CLI wrapper)\n- worklog (scripts + templates)\n- code-review (has lenses, might want hooks)\n- ops-review (same pattern)","status":"open","priority":2,"issue_type":"epic","created_at":"2026-01-09T10:59:12.291560832-08:00","created_by":"dan","updated_at":"2026-01-09T10:59:12.291560832-08:00"}
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{"id":"skills-6x1","title":"Epic: emes plugin architecture alignment","description":"Convert skills to emes-style plugin architecture for portability across Claude Code, Gemini, and VPS deployment (ops-jrz1).\n\n**emes tools (evil-mind-evil-sword org):**\n- tissue: Git-native issue tracking (machine-first)\n- idle: Quality gate (blocks exit until reviewer approves)\n- jwz: Async messaging with identity/git context\n- marketplace: Plugin distribution registry\n\n**Conversion work:**\n1. Add .claude-plugin/plugin.json to each skill\n2. Restructure: SKILL.md → skills/\u003cname\u003e.md (auto-discovery)\n3. Add hooks/ where applicable (quality gates)\n4. Create marketplace.json registry\n5. Test with ops-jrz1 deployment\n\n**Key principles from emes:**\n- Pull context on-demand (not big upfront injections)\n- Mechanical enforcement via hooks (not prompts)\n- References over inline content\n- Machine-first interfaces (JSON output)\n\n**Candidates for conversion:**\n- orch (simple CLI wrapper)\n- worklog (scripts + templates)\n- code-review (has lenses, might want hooks)\n- ops-review (same pattern)","status":"closed","priority":2,"issue_type":"epic","created_at":"2026-01-09T10:59:12.291560832-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:41.429380141-08:00","closed_at":"2026-01-09T17:14:41.429380141-08:00","close_reason":"Dual-publish complete. Ongoing cross-agent work continues under skills-hf1"}
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{"id":"skills-7bu","title":"Add atomic file operations to update scripts","description":"Files affected:\n- skills/update-opencode/scripts/update-nix-file.sh\n- .specify/scripts/bash/update-agent-context.sh\n\nIssues:\n- Uses sed -i which can corrupt on error\n- No rollback mechanism despite creating backups\n- Unsafe regex patterns with complex escaping\n\nFix:\n- Write to temp file, then atomic mv\n- Validate output before replacing original\n- Add rollback on failure\n\nSeverity: MEDIUM","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:02.334416215-05:00","updated_at":"2026-01-03T12:08:56.822659199-08:00","closed_at":"2026-01-03T12:08:56.822659199-08:00","close_reason":"Implemented atomic updates using temp files and traps in update-nix-file.sh, update-agent-context.sh, and deploy-skill.sh. Added validation before replacing original files."}
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{"id":"skills-7s0","title":"Compare STATIC_DATA.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:55.193704589-08:00","updated_at":"2025-12-03T20:19:29.659256809-08:00","closed_at":"2025-12-03T20:19:29.659256809-08:00","dependencies":[{"issue_id":"skills-7s0","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:55.195160705-08:00","created_by":"daemon","metadata":"{}"}]}
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{"id":"skills-7sh","title":"Set up bd-issue-tracking Claude Code skill from beads repo","description":"Install the beads Claude Code skill from https://github.com/steveyegge/beads/tree/main/examples/claude-code-skill\n\nThis skill teaches Claude how to effectively use beads for issue tracking across multi-session coding workflows. It provides strategic guidance on when/how to use beads, not just command syntax.\n\nFiles to install to ~/.claude/skills/bd-issue-tracking/:\n- SKILL.md - Core workflow patterns and decision criteria\n- BOUNDARIES.md - When to use beads vs markdown alternatives\n- CLI_REFERENCE.md - Complete command documentation\n- DEPENDENCIES.md - Relationship types and patterns\n- WORKFLOWS.md - Step-by-step procedures\n- ISSUE_CREATION.md - Quality guidelines\n- RESUMABILITY.md - Making work resumable across sessions\n- STATIC_DATA.md - Using beads as reference databases\n\nCan symlink or copy the files. Restart Claude Code after install.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T17:53:43.254007992-08:00","updated_at":"2025-12-03T20:04:53.416579381-08:00","closed_at":"2025-12-03T20:04:53.416579381-08:00"}
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{"id":"skills-ebl","title":"Benchmark vision model UI understanding","description":"## Goal\nMeasure how well vision models can answer UI questions from screenshots.\n\n## Test cases\n1. **Element location**: \"Where is the Save button?\" → coordinates\n2. **Element identification**: \"What buttons are visible?\" → list\n3. **State detection**: \"Is the checkbox checked?\" → boolean\n4. **Text extraction**: \"What does the error message say?\" → text\n5. **Layout understanding**: \"What's in the sidebar?\" → structure\n\n## Metrics\n- Accuracy: Does the answer match ground truth?\n- Precision: How close are coordinates to actual element centers?\n- Latency: Time from query to response\n- Cost: Tokens consumed per query\n\n## Prompt engineering questions\n- Does adding a grid overlay help coordinate precision?\n- What prompt format gives most actionable coordinates?\n- Can we get bounding boxes vs point coordinates?\n\n## Comparison baseline\n- Manual annotation of test screenshots\n- AT-SPI data (once enabled) as ground truth\n\n## Depends on\n- Test screenshots from real apps\n- Ground truth annotations","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-17T14:13:10.038933798-08:00","updated_at":"2025-12-29T15:26:19.822655148-05:00","closed_at":"2025-12-29T15:26:19.822655148-05:00","close_reason":"Benchmark complete. Vision models excellent for semantic understanding, approximate for coordinates. Recommend hybrid AT-SPI + vision. See docs/research/vision-ui-benchmark-2025-12-29.md"}
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{"id":"skills-f2p","title":"Skills + Molecules Integration","description":"Integrate skills with beads molecules system.\n\nDesign work tracked in dotfiles (dotfiles-jjb).\n\nComponents:\n- Checklist support (lightweight skills)\n- Audit integration (bd audit for skill execution)\n- Skill frontmatter for triggers/tracking\n- Proto packaging alongside skills\n\nSee: ~/proj/dotfiles ADR work","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-12-23T17:58:55.999438985-05:00","updated_at":"2025-12-23T19:22:38.577280129-05:00","closed_at":"2025-12-23T19:22:38.577280129-05:00","close_reason":"Superseded by skills-4u0 (migrated from dotfiles)","dependencies":[{"issue_id":"skills-f2p","depends_on_id":"skills-vpy","type":"blocks","created_at":"2025-12-23T17:59:17.976956454-05:00","created_by":"daemon"},{"issue_id":"skills-f2p","depends_on_id":"skills-u3d","type":"blocks","created_at":"2025-12-23T17:59:18.015216054-05:00","created_by":"daemon"}]}
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{"id":"skills-fo3","title":"Compare WORKFLOWS.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:54.283175561-08:00","updated_at":"2025-12-03T20:19:28.897037199-08:00","closed_at":"2025-12-03T20:19:28.897037199-08:00","dependencies":[{"issue_id":"skills-fo3","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:54.286009672-08:00","created_by":"daemon","metadata":"{}"}]}
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{"id":"skills-fqu","title":"Research: Agent capability matrix","description":"Document what each agent can and cannot do for cross-agent design decisions.\n\nAgents to cover:\n- Claude Code (claude CLI)\n- Gemini (gemini CLI / AI Studio)\n- OpenCode\n- Codex (OpenAI)\n\nCapabilities to assess:\n- Hooks / lifecycle events\n- Subagent spawning\n- File system access (paths, restrictions)\n- CLI tool execution\n- State persistence\n- Context window / memory\n\nOutput: Matrix showing capability parity and gaps","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-09T17:14:20.541961958-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:20.541961958-08:00"}
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{"id":"skills-fvc","title":"Code Review: {{target}}","description":"Multi-lens code review workflow for {{target}}.\n\n## Philosophy\nThe LLM stays in the loop at every step - this is agent-assisted review, not automated parsing. The agent applies judgment about what's worth filing, how to prioritize, and what context to include.\n\n## Variables\n- target: File or directory to review\n\n## Workflow\n1. Explore codebase to find candidates (if target is directory)\n2. Run lenses via orch consensus for multi-model perspective\n3. Analyze findings - LLM synthesizes across lenses and models\n4. File issues with judgment - group related, set priorities, add context\n5. Summarize for digest\n\n## Lenses Available\n- bloat: size, complexity, SRP violations\n- smells: readability, naming, control flow\n- dead-code: unused, unreachable, obsolete\n- redundancy: duplication, YAGNI, parallel systems","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-12-25T10:10:57.652098447-05:00","updated_at":"2025-12-26T23:22:41.408582818-05:00","closed_at":"2025-12-26T23:22:41.408582818-05:00","close_reason":"Replaced by /code-review skill","labels":["template"]}
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{"id":"skills-fvc.1","title":"Run bloat lens on {{target}}","description":"Run bloat review lens via orch:\n\n```bash\norch consensus \"$(cat ~/.config/lenses/bloat.md)\" flash gemini --file {{target}} --mode open\n```\n\nLook for: file size, function length, complexity, SRP violations.\nRecord findings for later filing.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-25T10:13:59.789715667-05:00","updated_at":"2025-12-26T23:22:41.416754154-05:00","closed_at":"2025-12-26T23:22:41.416754154-05:00","close_reason":"Replaced by /code-review skill","dependencies":[{"issue_id":"skills-fvc.1","depends_on_id":"skills-fvc","type":"parent-child","created_at":"2025-12-25T10:13:59.80248308-05:00","created_by":"daemon"}]}
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{"id":"skills-fvc.2","title":"Run smells lens on {{target}}","description":"Run smells review lens via orch:\n\n```bash\norch consensus \"$(cat ~/.config/lenses/smells.md)\" flash gemini --file {{target}} --mode open\n```\n\nLook for: naming issues, control flow smells, data smells, structural issues.\nRecord findings for later filing.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-25T10:16:13.977562568-05:00","updated_at":"2025-12-26T23:22:41.423564011-05:00","closed_at":"2025-12-26T23:22:41.423564011-05:00","close_reason":"Replaced by /code-review skill","dependencies":[{"issue_id":"skills-fvc.2","depends_on_id":"skills-fvc","type":"parent-child","created_at":"2025-12-25T10:16:13.989662453-05:00","created_by":"daemon"}]}
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{"id":"skills-gq9","title":"Define structured skill reference schema","description":"Replace simple skill: string with structured object.\n\nCurrent (too weak):\n skill: worklog\n\nProposed:\n skill:\n id: worklog\n ref: \"git+file://...#worklog@abc123\"\n inputs:\n session: \"{{session}}\"\n expects:\n files: [\"docs/worklogs/{{session}}.org\"]\n\nFrom orch consensus: both GPT and Gemini flagged this as critical gap.\nNo mechanism to pass args from molecule to skill.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T19:49:30.529899123-05:00","updated_at":"2025-12-28T22:46:28.371352259-05:00","closed_at":"2025-12-28T22:46:28.371352259-05:00","close_reason":"Deferred: structured schema was for molecule→skill integration. Current approach (agent reads SKILL.md directly) works well. Skills as entrypoints are simpler than protos. Revisit if programmatic workflows become active.","dependencies":[{"issue_id":"skills-gq9","depends_on_id":"skills-oes","type":"blocks","created_at":"2025-12-23T19:50:10.337111856-05:00","created_by":"daemon"},{"issue_id":"skills-gq9","depends_on_id":"skills-8y6","type":"blocks","created_at":"2025-12-23T19:50:10.388301727-05:00","created_by":"daemon"}]}
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{"id":"skills-gvj","title":"Orch-in-the-Middle: LSP proxy for multi-model refactors","description":"Write an LSP proxy (Go/Rust) that:\n- Intercepts rename/code-action requests from editor\n- Sends to Orch for multi-model proposals\n- Validates proposals against real headless LSP\n- Returns winning WorkspaceEdit to editor\n\nGet consensus refactoring inside VS Code/Neovim by configuring LSP server path in home-manager.","status":"closed","priority":4,"issue_type":"feature","created_at":"2025-12-24T02:29:56.623189042-05:00","updated_at":"2025-12-29T14:37:35.360129462-05:00","closed_at":"2025-12-29T14:37:35.360129462-05:00","close_reason":"Parked: waiting on gastown (Steve Yegge's orchestration layer for beads). Revisit when gastown lands."}
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{"id":"skills-h9f","title":"spec-review: Balance negativity bias in prompts","description":"'Be critical' and 'devil's advocate' can bias toward over-flagging without acknowledging what's good.\n\nAdd:\n- 'List top 3 strongest parts of the document'\n- 'Call out where document is sufficiently clear/testable'\n- Categorize :against concerns as confirmed/plausible/rejected","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-15T00:23:26.418087998-08:00","updated_at":"2025-12-15T14:07:39.520818417-08:00","closed_at":"2025-12-15T14:07:39.520818417-08:00"}
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{"id":"skills-hf1","title":"Cross-agent skill portability and quality gates","description":"Design and implement patterns for skills that work across multiple AI agents (Claude, Gemini, OpenCode).\n\n## Problem Statement\n\nWe want skills and quality enforcement to work regardless of which agent is:\n- The primary orchestrator\n- The worker agent\n- The reviewer agent\n\nCurrent blockers:\n- Claude Code hooks (Stop, etc.) don't exist in other agents\n- Path restrictions differ (Gemini can't read ~/.claude/skills/)\n- Subagent spawning differs across agents\n- alice/idle quality gate is Claude-specific\n\n## Goals\n\n1. **Portable skills** - Same skill works in Claude, Gemini, OpenCode\n2. **Portable quality gates** - Adversarial review pattern across agents\n3. **Flexible orchestration** - Any agent can orchestrate, any can be worker/reviewer\n\n## Key Research Areas\n\n- Dual-publish pattern (done: ADR-005)\n- Cross-agent quality gate mechanisms\n- State management (jwz vs beads vs other)\n- Protocol vs mechanical enforcement trade-offs\n- Orchestrator pattern design\n\n## Related Work\n\n- emes ecosystem (alice, jwz, tissue)\n- Our dual-publish implementation\n- orch multi-model consensus","status":"open","priority":2,"issue_type":"epic","created_at":"2026-01-09T17:13:48.116438862-08:00","created_by":"dan","updated_at":"2026-01-09T17:13:54.006968189-08:00","dependencies":[{"issue_id":"skills-hf1","depends_on_id":"skills-3gk","type":"blocks","created_at":"2026-01-09T17:14:26.901205948-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-fqu","type":"blocks","created_at":"2026-01-09T17:14:26.940496671-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-3ja","type":"blocks","created_at":"2026-01-09T17:14:26.97832902-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-mjf","type":"blocks","created_at":"2026-01-09T17:14:27.011077849-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-6fu","type":"blocks","created_at":"2026-01-09T17:14:27.045750539-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-bo8","type":"blocks","created_at":"2026-01-09T17:14:27.150392041-08:00","created_by":"dan"},{"issue_id":"skills-hf1","depends_on_id":"skills-5kv","type":"blocks","created_at":"2026-01-09T17:14:27.192813254-08:00","created_by":"dan"}]}
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{"id":"skills-hgm","title":"Add tests for agent file update logic","description":"File: .specify/scripts/bash/update-agent-context.sh (lines 360-499)\n\nCritical logic with NO test coverage:\n- Malformed agent files (missing sections)\n- Multiple section headers on same line\n- Empty file handling\n- Timestamp update verification\n- State machine correctness\n\nRisk: HIGH - corrupts agent context files on failure\n\nFix:\n- Create test fixtures for various file states\n- Test each state transition\n- Verify idempotency\n\nSeverity: HIGH","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-24T02:51:00.793493549-05:00","updated_at":"2026-01-02T02:12:09.368531967-05:00","closed_at":"2026-01-02T02:12:09.368531967-05:00","close_reason":"33 tests added covering all major code paths. Also fixed bug where Recent Changes section was skipped when preceded by Active Technologies."}
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{"id":"skills-hh2","title":"skill: rename_symbol with LSP + validation","description":"Skill that performs safe renames:\n1. Uses LSP textDocument/rename\n2. Runs formatters\n3. Checks LSP diagnostics post-rename\n4. Opens bead if errors remain\n5. Updates doc references using hover/signatureHelp\n\nInput: new name, scope. Output: clean rename or bead with issues.","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:29:56.87156069-05:00","updated_at":"2025-12-24T02:29:56.87156069-05:00","dependencies":[{"issue_id":"skills-hh2","depends_on_id":"skills-gga","type":"blocks","created_at":"2025-12-24T02:30:06.583813579-05:00","created_by":"daemon"}]}
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{"id":"skills-hhz","title":"Add doc-review skill","description":"Create skill for doc-review CLI tool (~/proj/doc-review). Tool lints markdown docs for AI agent consumption using Vale + LLM hybrid architecture. Needs: 1) flake.nix in doc-review project, 2) skill SKILL.md, 3) register in availableSkills","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-30T11:24:41.321478346-05:00","created_by":"dan","updated_at":"2025-12-31T00:00:30.74314365-05:00","closed_at":"2025-12-31T00:00:30.74314365-05:00","close_reason":"doc-review skill created in skills/doc-review/SKILL.md"}
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@ -106,6 +111,7 @@
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{"id":"skills-lvg","title":"Compare ISSUE_CREATION.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:54.609282051-08:00","updated_at":"2025-12-03T20:19:29.134966356-08:00","closed_at":"2025-12-03T20:19:29.134966356-08:00","dependencies":[{"issue_id":"skills-lvg","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:54.610717055-08:00","created_by":"daemon","metadata":"{}"}]}
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{"id":"skills-lzk","title":"Simplify branch name generation in create-new-feature.sh","description":"File: .specify/scripts/bash/create-new-feature.sh (lines 137-181)\n\nIssues:\n- 3 nested loops/conditionals\n- Complex string transformations with multiple sed operations\n- Stop-words list and filtering logic hard to maintain\n\nFix:\n- Extract to separate function\n- Simplify word filtering logic\n- Add input validation\n\nSeverity: MEDIUM","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:14.286951249-05:00","updated_at":"2026-01-03T12:13:27.083639201-08:00","closed_at":"2026-01-03T12:13:27.083639201-08:00","close_reason":"Simplifed generate_branch_name logic, added main() function, and BASH_SOURCE guard for testability."}
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{"id":"skills-m21","title":"Apply niri-window-capture code review recommendations","description":"CODE-REVIEW-niri-window-capture.md identifies action items: add dependency checks to scripts, improve error handling for niri failures, add screenshot directory validation, implement rate limiting. See High/Medium priority sections.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:24.648846875-08:00","updated_at":"2025-12-28T20:16:53.914141949-05:00","closed_at":"2025-12-28T20:16:53.914141949-05:00","close_reason":"Implemented all 4 high-priority recommendations from code review: dependency checks, directory validation, error handling, audit logging"}
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{"id":"skills-mjf","title":"Design: Portable adversarial reviewer","description":"Design a reviewer agent/skill that can run on any capable model.\n\nalice is Claude Opus with specific tools. We need:\n- Model-agnostic reviewer prompt/instructions\n- Tool requirements (read-only: Read, Grep, Glob, Bash)\n- Integration with orch for multi-model consensus\n- Decision format (APPROVED/ISSUES)\n- Issue filing (beads or tissue)\n\nKey principles from alice:\n- Work for the USER, not the agent\n- Assume errors exist, find them\n- Steel-man then attack\n- Seek second opinions\n\nOutput: Reviewer skill spec that works across agents","status":"open","priority":3,"issue_type":"task","created_at":"2026-01-09T17:14:20.778647076-08:00","created_by":"dan","updated_at":"2026-01-09T17:14:20.778647076-08:00"}
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{"id":"skills-mx3","title":"spec-review: Define consensus thresholds and decision rules","description":"'Use judgment' for mixed results leads to inconsistent decisions.\n\nDefine:\n- What constitutes consensus (2/3? unanimous?)\n- How to handle NEUTRAL votes\n- Tie-break rules\n- When human override is acceptable and how to document it","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-15T00:23:24.121175736-08:00","updated_at":"2025-12-15T13:58:04.339283238-08:00","closed_at":"2025-12-15T13:58:04.339283238-08:00"}
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{"id":"skills-njb","title":"worklog: clarify or remove semantic compression references","description":"SKILL.md references 'semantic compression is a planned workflow' multiple times but it's not implemented. Speculative generality - adds cognitive load for non-existent feature. Either implement or move to design notes. Found by smells lens review.","status":"closed","priority":4,"issue_type":"task","created_at":"2025-12-25T02:03:25.387405002-05:00","updated_at":"2025-12-27T10:11:48.169923742-05:00","closed_at":"2025-12-27T10:11:48.169923742-05:00","close_reason":"Closed"}
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{"id":"skills-oes","title":"Define skill manifest format","description":"Skills need to declare their interface so beads can validate.\n\nManifest should include:\n- Required inputs (args, env vars)\n- Optional inputs with defaults\n- Expected outputs (files, artifacts)\n- Preconditions (tools, repos, permissions)\n\nLocation: SKILL.md frontmatter or separate manifest.yaml\n\nEnables: Proto validation before spawning, better error messages.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T19:49:30.673372413-05:00","updated_at":"2025-12-23T20:55:04.427620449-05:00","closed_at":"2025-12-23T20:55:04.427620449-05:00","close_reason":"ADRs revised with orch consensus feedback"}
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skills-9jk
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skills-hf1
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Reference in a new issue