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{"id":"skills-6e3","title":"Searchable Claude Code conversation history","description":"## Context\nClaude Code persists full conversations in `~/.claude/projects/\u003cproject\u003e/\u003cuuid\u003e.jsonl`. This is complete but not searchable - can't easily find \"that session where we solved X\".\n\n## Goal\nMake conversation history searchable without requiring manual worklogs.\n\n## Approach\n\n### Index structure\n```\n~/.claude/projects/\u003cproject\u003e/\n \u003cuuid\u003e.jsonl # raw conversation (existing)\n index.jsonl # session metadata + summaries (new)\n```\n\n### Index entry format\n```json\n{\n \"uuid\": \"f9a4c161-...\",\n \"date\": \"2025-12-17\",\n \"project\": \"/home/dan/proj/skills\",\n \"summary\": \"Explored Wayland desktop automation, AT-SPI investigation, vision model benchmark\",\n \"keywords\": [\"wayland\", \"niri\", \"at-spi\", \"automation\", \"seeing-problem\"],\n \"commits\": [\"906f2bc\", \"0b97155\"],\n \"duration_minutes\": 90,\n \"message_count\": 409\n}\n```\n\n### Features needed\n1. **Index builder** - Parse JSONL, extract/generate summary + keywords\n2. **Search CLI** - `claude-search \"AT-SPI wayland\"` → matching sessions\n3. **Auto-index hook** - Update index on session end or compaction\n\n## Questions\n- Generate summaries via AI or extract heuristically?\n- Index per-project or global?\n- How to handle very long sessions (multiple topics)?\n\n## Value\n- Find past solutions without remembering dates\n- Model reflection: include relevant past sessions in context\n- Replace manual worklogs with auto-generated metadata","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-17T15:56:50.913766392-08:00","updated_at":"2025-12-17T15:56:50.913766392-08:00"}
{"id":"skills-6gw","title":"Add artifact provenance to traces","description":"Current: files_created lists paths only.\nProblem: Can't detect regressions or validate outputs.\n\nAdd:\n- Content hash (sha256)\n- File size\n- For modifications: git_diff_summary (files changed, line counts)\n\nExample:\n outputs:\n artifacts:\n - path: docs/worklogs/...\n sha256: abc123...\n size: 1234\n action: created|modified\n\nEnables: diff traces, regression testing, validation.","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-23T19:49:48.654952533-05:00","updated_at":"2025-12-23T19:49:48.654952533-05:00"}
{"id":"skills-6jw","title":"spec-review: Add severity labeling to prompts and reviews","description":"Reviews produce flat lists mixing blockers with minor nits. Hard to make decisions.\n\nAdd to prompts:\n- Require severity labels: Blocker / High / Medium / Low\n- Sort output by severity\n- Include impact and likelihood for each issue","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-15T00:23:23.334156366-08:00","updated_at":"2025-12-15T13:00:32.678573181-08:00","closed_at":"2025-12-15T13:00:32.678573181-08:00"}
{"id":"skills-7bu","title":"Add atomic file operations to update scripts","description":"Files affected:\n- skills/update-opencode/scripts/update-nix-file.sh\n- .specify/scripts/bash/update-agent-context.sh\n\nIssues:\n- Uses sed -i which can corrupt on error\n- No rollback mechanism despite creating backups\n- Unsafe regex patterns with complex escaping\n\nFix:\n- Write to temp file, then atomic mv\n- Validate output before replacing original\n- Add rollback on failure\n\nSeverity: MEDIUM","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:02.334416215-05:00","updated_at":"2025-12-24T02:51:02.334416215-05:00"}
{"id":"skills-7s0","title":"Compare STATIC_DATA.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:55.193704589-08:00","updated_at":"2025-12-03T20:19:29.659256809-08:00","closed_at":"2025-12-03T20:19:29.659256809-08:00","dependencies":[{"issue_id":"skills-7s0","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:55.195160705-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-7sh","title":"Set up bd-issue-tracking Claude Code skill from beads repo","description":"Install the beads Claude Code skill from https://github.com/steveyegge/beads/tree/main/examples/claude-code-skill\n\nThis skill teaches Claude how to effectively use beads for issue tracking across multi-session coding workflows. It provides strategic guidance on when/how to use beads, not just command syntax.\n\nFiles to install to ~/.claude/skills/bd-issue-tracking/:\n- SKILL.md - Core workflow patterns and decision criteria\n- BOUNDARIES.md - When to use beads vs markdown alternatives\n- CLI_REFERENCE.md - Complete command documentation\n- DEPENDENCIES.md - Relationship types and patterns\n- WORKFLOWS.md - Step-by-step procedures\n- ISSUE_CREATION.md - Quality guidelines\n- RESUMABILITY.md - Making work resumable across sessions\n- STATIC_DATA.md - Using beads as reference databases\n\nCan symlink or copy the files. Restart Claude Code after install.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T17:53:43.254007992-08:00","updated_at":"2025-12-03T20:04:53.416579381-08:00","closed_at":"2025-12-03T20:04:53.416579381-08:00"}
{"id":"skills-8cc","title":"Remove dead code: unused ARGS variable","description":"File: .specify/scripts/bash/create-new-feature.sh\n\nLine 8: ARGS=() declared but never used\nLine 251: export SPECIFY_FEATURE - unclear if used downstream\n\nFix:\n- Remove unused ARGS declaration\n- Verify SPECIFY_FEATURE is used or remove\n\nSeverity: LOW","status":"open","priority":4,"issue_type":"task","created_at":"2025-12-24T02:50:59.332192076-05:00","updated_at":"2025-12-24T02:50:59.332192076-05:00"}
{"id":"skills-8d4","title":"Compare CLI_REFERENCE.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:53.268324087-08:00","updated_at":"2025-12-03T20:17:26.552616779-08:00","closed_at":"2025-12-03T20:17:26.552616779-08:00","dependencies":[{"issue_id":"skills-8d4","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:53.27265681-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-8d9","title":"Add conversational patterns to orch skill","description":"## Context\nThe orch skill currently documents consensus and single-shot chat, but doesn't\nteach agents how to use orch for multi-turn conversations with external AIs.\n\n## Goal\nAdd documentation and patterns for agent-driven conversations where the calling\nagent (Claude Code) orchestrates multi-turn dialogues using orch primitives.\n\n## Patterns to document\n\n### Session-based multi-turn\n```bash\n# Initial query\nRESPONSE=$(orch chat \"Analyze this\" --model claude --format json)\nSESSION=$(echo \"$RESPONSE\" | jq -r .session_id)\n\n# Continue conversation\norch chat \"Elaborate on X\" --model claude --session $SESSION\n\n# Inspect state\norch sessions info $SESSION\norch sessions show $SESSION --last 2 --format text\n```\n\n### Cross-model dialogue\n```bash\n# Get one model's take\nCLAUDE=$(orch chat \"Review this\" --model claude --format json)\nCLAUDE_SAYS=$(echo \"$CLAUDE\" | jq -r '.responses[0].content')\n\n# Ask another model to respond\norch chat \"Claude said: $CLAUDE_SAYS\n\nWhat's your perspective?\" --model gemini\n```\n\n### When to use conversations vs consensus\n- Consensus: quick parallel opinions on a decision\n- Conversation: deeper exploration, follow-up questions, iterative refinement\n\n## Files\n- skills/orch/SKILL.md\n\n## Related\n- orch-c3r: Design: Session introspection for agent-driven conversations (in orch repo)","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-18T19:57:28.201494288-08:00","updated_at":"2025-12-18T19:57:28.201494288-08:00"}
{"id":"skills-8v0","title":"Consolidate skill list definitions (flake.nix + ai-skills.nix)","description":"Skill list duplicated in:\n- flake.nix (lines 15-27)\n- modules/ai-skills.nix (lines 8-18)\n\nIssues:\n- Manual sync required when adding skills\n- No validation that referenced skills exist\n\nFix:\n- Single source of truth for skill list\n- Consider generating one from the other\n\nSeverity: MEDIUM","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:14.432158871-05:00","updated_at":"2025-12-24T02:51:14.432158871-05:00"}
{"id":"skills-8y6","title":"Define skill versioning strategy","description":"Git SHA alone is insufficient. Need tuple approach:\n\n- skill_source_rev: git SHA (if available)\n- skill_content_hash: hash of SKILL.md + scripts\n- runtime_ref: flake.lock hash or Nix store path\n\nQuestions to resolve:\n- Do Protos pin to versions (stable but maintenance) or float on latest (risky)?\n- How to handle breaking changes in skills?\n- Record in wisp trace vs proto definition?\n\nFrom consensus: both models flagged versioning instability as high severity.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T19:49:30.839064445-05:00","updated_at":"2025-12-23T20:55:04.439779336-05:00","closed_at":"2025-12-23T20:55:04.439779336-05:00","close_reason":"ADRs revised with orch consensus feedback"}
{"id":"skills-9af","title":"spec-review: Add spike/research task handling","description":"Tasks like 'Investigate X' can linger without clear outcomes.\n\nAdd to REVIEW_TASKS:\n- Flag research/spike tasks\n- Require timebox and concrete outputs (decision record, prototype, risks)\n- Pattern for handling unknowns","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-15T00:23:26.887719136-08:00","updated_at":"2025-12-15T14:08:13.441095034-08:00","closed_at":"2025-12-15T14:08:13.441095034-08:00"}
{"id":"skills-9bc","title":"Investigate pre-compression hook for worklogs","description":"## Revised Understanding\n\nClaude Code already persists full conversation history in `~/.claude/projects/\u003cproject\u003e/\u003csession-id\u003e.jsonl`. Pre-compact hooks aren't needed for data capture.\n\n## Question\nWhat's the ideal workflow for generating worklogs from session data?\n\n## Options\n\n### 1. Post-session script\n- Run after exiting Claude Code\n- Reads most recent session JSONL\n- Generates worklog from conversation content\n- Pro: Async, doesn't interrupt flow\n- Con: May forget to run it\n\n### 2. On-demand slash command\n- `/worklog-from-session` or similar\n- Reads current session's JSONL file\n- Generates worklog with full context\n- Pro: Explicit control\n- Con: Still need to remember\n\n### 3. Pre-compact reminder\n- Hook prints reminder: \"Consider running /worklog\"\n- Doesn't automate, just nudges\n- Pro: Simple, non-intrusive\n- Con: Easy to dismiss\n\n### 4. Async batch processing\n- Process old sessions whenever\n- All data persists in JSONL files\n- Pro: No urgency, can do later\n- Con: Context may be stale\n\n## Data Format\nSession files contain:\n- User messages with timestamp\n- Assistant responses with model info\n- Tool calls and results\n- Git branch, cwd, version info\n\n## Next Steps\n- Decide preferred workflow\n- Build script to parse session JSONL → worklog format","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-17T14:32:32.568430817-08:00","updated_at":"2025-12-17T15:56:38.864916015-08:00","closed_at":"2025-12-17T15:56:38.864916015-08:00","close_reason":"Pivoted: worklogs may be redundant given full conversation persistence. New approach: make conversations searchable directly."}
@ -42,6 +45,7 @@
{"id":"skills-czz","title":"Research OpenCode agents for skill integration","description":"DEPLOYMENT.md:218 has TODO to research OpenCode agents. Need to understand how Build/Plan/custom agents work and whether skills need agent-specific handling.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:24.855701141-08:00","updated_at":"2025-11-30T11:58:24.855701141-08:00"}
{"id":"skills-d6r","title":"Design: orch as local agent framework","description":"# Orch Evolution: From Consensus Tool to Agent Framework\n\n## Current State\n- `orch consensus` - multi-model queries\n- `orch chat` - single model queries\n- No state, no pipelines, no retries\n\n## Proposed Extensions\n\n### Pipeline Mode\n```bash\norch pipeline config.yaml\n```\nWhere config.yaml defines:\n- Stages (triage → specialists → verify)\n- Routing logic (if triage finds X, run specialist Y)\n- Retry policy\n\n### Evaluate Mode (doc-review specific)\n```bash\norch evaluate doc.md --rubrics=1,4,7 --output=patches/\n```\n- Applies specific rubrics to document\n- Outputs JSON or patches\n\n### Parallel Mode\n```bash\norch parallel --fan-out=5 --template=\"evaluate {rubric}\" rubrics.txt\n```\n- Fan-out to multiple parallel calls\n- Aggregate results\n\n## Open Questions\n1. Does this belong in orch or a separate tool?\n2. Should orch pipelines be YAML-defined or code-defined?\n3. How does this relate to Claude Code Task subagents?\n4. What's the minimal viable extension?\n\n## Context\nEmerged from doc-review skill design - need multi-pass evaluation but don't want to adopt heavy framework (LangGraph, etc.)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-04T16:06:56.681282678-08:00","updated_at":"2025-12-04T16:44:08.652185174-08:00","closed_at":"2025-12-04T16:44:08.652185174-08:00"}
{"id":"skills-d87","title":"orch skill is documentation-only, needs working invocation mechanism","description":"The orch skill provides SKILL.md documentation but no working invocation mechanism.\n\n**Resolution**: Install orch globally via home-manager (dotfiles-3to). The skill documents a system tool, doesn't need to bundle it.\n\n**Blocked by**: dotfiles-3to (Add orch CLI to home-manager packages)","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-12-14T11:54:03.157039164-08:00","updated_at":"2025-12-16T18:45:24.39235833-08:00","closed_at":"2025-12-16T18:45:24.39235833-08:00","close_reason":"Updated docs to use globally installed orch CLI"}
{"id":"skills-dnm","title":"Refactor deploy-skill.sh: dedupe injection calls","description":"File: bin/deploy-skill.sh (lines 112-189)\n\nIssues:\n- Three nearly-identical inject_nix_config() calls\n- Only difference is config block content and target file\n- Repeated pattern bloats file\n\nFix:\n- Parameterize inject_nix_config() better\n- Or create config-specific injection functions\n- Reduce duplication\n\nSeverity: MEDIUM","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:01.855452762-05:00","updated_at":"2025-12-24T02:51:01.855452762-05:00"}
{"id":"skills-dpw","title":"orch: add command to show available/configured models","description":"## Problem\n\nWhen trying to use orch, you have to trial-and-error through models to find which ones have API keys configured. Each failure looks like:\n\n```\nError: GEMINI_API_KEY not set. Required for Google Gemini models.\n```\n\nNo way to know upfront which models are usable.\n\n## Proposed Solution\n\nAdd `orch models` or `orch status` command:\n\n```bash\n$ orch models\nAvailable models:\n ✓ flash (GEMINI_API_KEY set)\n ✓ gemini (GEMINI_API_KEY set)\n ✗ deepseek (OPENROUTER_KEY not set)\n ✗ qwen (OPENROUTER_KEY not set)\n ✓ gpt (OPENAI_API_KEY set)\n```\n\nOr at minimum, on failure suggest alternatives:\n```\nError: GEMINI_API_KEY not set. Try --model gpt or --model deepseek instead.\n```\n\n## Context\n\nHit this while trying to brainstorm with high-temp gemini - had to try 4 models before realizing none were configured in this environment.","status":"closed","priority":3,"issue_type":"feature","created_at":"2025-12-04T14:10:07.069103175-08:00","updated_at":"2025-12-04T14:11:05.49122538-08:00","closed_at":"2025-12-04T14:11:05.49122538-08:00"}
{"id":"skills-e96","title":"skill: semantic-grep using LSP","description":"Use workspace/symbol, documentSymbol, and references instead of ripgrep.\n\nExample: 'Find all places where we handle User objects but only where we modify the email field directly'\n- LSP references finds all User usages\n- Filter by AST analysis for .email assignments\n- Return hit list for bead or further processing\n\nBetter than regex for Go interfaces, Rust traits, TS types.","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:29:57.119983837-05:00","updated_at":"2025-12-24T02:29:57.119983837-05:00","dependencies":[{"issue_id":"skills-e96","depends_on_id":"skills-gga","type":"blocks","created_at":"2025-12-24T02:30:06.632906383-05:00","created_by":"daemon"}]}
{"id":"skills-ebh","title":"Compare bd-issue-tracking skill files with upstream","description":"Fetch upstream beads skill files and compare with our condensed versions to identify differences","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:14:07.886535859-08:00","updated_at":"2025-12-03T20:19:37.579815337-08:00","closed_at":"2025-12-03T20:19:37.579815337-08:00"}
@ -54,8 +58,9 @@
{"id":"skills-gq9","title":"Define structured skill reference schema","description":"Replace simple skill: string with structured object.\n\nCurrent (too weak):\n skill: worklog\n\nProposed:\n skill:\n id: worklog\n ref: \"git+file://...#worklog@abc123\"\n inputs:\n session: \"{{session}}\"\n expects:\n files: [\"docs/worklogs/{{session}}.org\"]\n\nFrom orch consensus: both GPT and Gemini flagged this as critical gap.\nNo mechanism to pass args from molecule to skill.","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-23T19:49:30.529899123-05:00","updated_at":"2025-12-23T19:49:30.529899123-05:00","dependencies":[{"issue_id":"skills-gq9","depends_on_id":"skills-oes","type":"blocks","created_at":"2025-12-23T19:50:10.337111856-05:00","created_by":"daemon"},{"issue_id":"skills-gq9","depends_on_id":"skills-8y6","type":"blocks","created_at":"2025-12-23T19:50:10.388301727-05:00","created_by":"daemon"}]}
{"id":"skills-gvj","title":"Orch-in-the-Middle: LSP proxy for multi-model refactors","description":"Write an LSP proxy (Go/Rust) that:\n- Intercepts rename/code-action requests from editor\n- Sends to Orch for multi-model proposals\n- Validates proposals against real headless LSP\n- Returns winning WorkspaceEdit to editor\n\nGet consensus refactoring inside VS Code/Neovim by configuring LSP server path in home-manager.","status":"open","priority":4,"issue_type":"feature","created_at":"2025-12-24T02:29:56.623189042-05:00","updated_at":"2025-12-24T02:29:56.623189042-05:00"}
{"id":"skills-h9f","title":"spec-review: Balance negativity bias in prompts","description":"'Be critical' and 'devil's advocate' can bias toward over-flagging without acknowledging what's good.\n\nAdd:\n- 'List top 3 strongest parts of the document'\n- 'Call out where document is sufficiently clear/testable'\n- Categorize :against concerns as confirmed/plausible/rejected","status":"closed","priority":3,"issue_type":"task","created_at":"2025-12-15T00:23:26.418087998-08:00","updated_at":"2025-12-15T14:07:39.520818417-08:00","closed_at":"2025-12-15T14:07:39.520818417-08:00"}
{"id":"skills-hgm","title":"Add tests for agent file update logic","description":"File: .specify/scripts/bash/update-agent-context.sh (lines 360-499)\n\nCritical logic with NO test coverage:\n- Malformed agent files (missing sections)\n- Multiple section headers on same line\n- Empty file handling\n- Timestamp update verification\n- State machine correctness\n\nRisk: HIGH - corrupts agent context files on failure\n\nFix:\n- Create test fixtures for various file states\n- Test each state transition\n- Verify idempotency\n\nSeverity: HIGH","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-24T02:51:00.793493549-05:00","updated_at":"2025-12-24T02:51:00.793493549-05:00"}
{"id":"skills-hh2","title":"skill: rename_symbol with LSP + validation","description":"Skill that performs safe renames:\n1. Uses LSP textDocument/rename\n2. Runs formatters\n3. Checks LSP diagnostics post-rename\n4. Opens bead if errors remain\n5. Updates doc references using hover/signatureHelp\n\nInput: new name, scope. Output: clean rename or bead with issues.","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:29:56.87156069-05:00","updated_at":"2025-12-24T02:29:56.87156069-05:00","dependencies":[{"issue_id":"skills-hh2","depends_on_id":"skills-gga","type":"blocks","created_at":"2025-12-24T02:30:06.583813579-05:00","created_by":"daemon"}]}
{"id":"skills-hin","title":"ADR: Skills and Molecules Integration Design","description":"Write Architecture Decision Record documenting:\n- Current state (skills via Nix/direnv, molecules via beads)\n- Decision to link via skill: references\n- Wisp trace format spec\n- Elevation pipeline design\n- Anti-patterns to avoid\n\nLocation: docs/adr/001-skills-molecules-integration.md\n\nMigrated from dotfiles-dn8 (was in_progress).","status":"in_progress","priority":2,"issue_type":"task","created_at":"2025-12-23T19:20:47.568903148-05:00","updated_at":"2025-12-23T19:22:28.264415397-05:00"}
{"id":"skills-hin","title":"ADR: Skills and Molecules Integration Design","description":"Write Architecture Decision Record documenting:\n- Current state (skills via Nix/direnv, molecules via beads)\n- Decision to link via skill: references\n- Wisp trace format spec\n- Elevation pipeline design\n- Anti-patterns to avoid\n\nLocation: docs/adr/001-skills-molecules-integration.md\n\nMigrated from dotfiles-dn8 (was in_progress).\n\n## Current State\n- ADR-001 drafted (high-level integration)\n- ADR-002, 003, 004 drafted and revised (manifest, versioning, security)\n- Orch consensus feedback incorporated\n\n## Parked\nDeferring finalization until we see Steve Yegge's new orchestration work and how it might inform our design.","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-23T19:20:47.568903148-05:00","updated_at":"2025-12-24T02:41:40.676399328-05:00"}
{"id":"skills-idb","title":"Handle concurrency and multi-agent execution","description":"Not addressed in ADR. Questions:\n\n- What happens when two agents run same skill on same mol step?\n- How to handle partial failures and resumptions?\n- Trace merging: append-only log vs latest-wins?\n\nNeeds:\n- execution_id and parent_execution_id in traces\n- Step completion idempotency declaration\n- Define how multiple traces attach to one mol node\n\nCan defer until basic integration works.","status":"open","priority":4,"issue_type":"task","created_at":"2025-12-23T19:49:59.608603168-05:00","updated_at":"2025-12-23T19:49:59.608603168-05:00"}
{"id":"skills-jbo","title":"Skills: verify symbols via LSP before suggesting","description":"Inversion: let LSP answer facts, let models answer strategy.\n\nBefore Claude suggests using a function/type:\n- Verify existence via workspace/symbol or go-to-definition\n- If not found, propose alternatives that ARE found\n- Gather definition, references, inferred types, diagnostics as context\n\nReduces hallucinated APIs and grounds patches in reality.","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-24T02:29:56.391182872-05:00","updated_at":"2025-12-24T02:29:56.391182872-05:00","dependencies":[{"issue_id":"skills-jbo","depends_on_id":"skills-gga","type":"blocks","created_at":"2025-12-24T02:30:06.529604354-05:00","created_by":"daemon"}]}
{"id":"skills-jeb","title":"Define wisp execution trace format","description":"Design structured format for skill execution traces in wisps:\n- skill_version (git SHA + flake hash)\n- inputs (context refs, env vars)\n- tool_calls [{cmd, args, exit_code, duration}]\n- checkpoints [{step, summary, timestamp}]\n- outputs (file diffs or refs)\n\nEnable: replay, diff traces, regression testing\n\nMigrated from dotfiles-ub9.","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-23T19:20:57.896088397-05:00","updated_at":"2025-12-23T19:20:57.896088397-05:00","dependencies":[{"issue_id":"skills-jeb","depends_on_id":"skills-hin","type":"blocks","created_at":"2025-12-23T19:21:39.588011474-05:00","created_by":"dan"},{"issue_id":"skills-jeb","depends_on_id":"skills-gq9","type":"blocks","created_at":"2025-12-23T19:50:10.069841366-05:00","created_by":"daemon"},{"issue_id":"skills-jeb","depends_on_id":"skills-be3","type":"blocks","created_at":"2025-12-23T19:50:10.117400312-05:00","created_by":"daemon"},{"issue_id":"skills-jeb","depends_on_id":"skills-ty7","type":"blocks","created_at":"2025-12-23T19:50:10.163656807-05:00","created_by":"daemon"},{"issue_id":"skills-jeb","depends_on_id":"skills-6gw","type":"blocks","created_at":"2025-12-23T19:50:10.202702536-05:00","created_by":"daemon"}]}
@ -64,18 +69,25 @@
{"id":"skills-le9","title":"beads new --from-cursor: capture symbol context","description":"When creating a bead, auto-capture LSP context:\n- Current symbol FQN (fully qualified name)\n- Definition snippet\n- Top 10 references/callers\n- Current diagnostics for the symbol\n\nMakes beads self-contained without copy/paste archaeology. Symbol URI allows jumping back to exact location even if file moved.","status":"open","priority":3,"issue_type":"feature","created_at":"2025-12-24T02:29:55.989876856-05:00","updated_at":"2025-12-24T02:29:55.989876856-05:00","dependencies":[{"issue_id":"skills-le9","depends_on_id":"skills-gga","type":"blocks","created_at":"2025-12-24T02:30:06.416484732-05:00","created_by":"daemon"}]}
{"id":"skills-lie","title":"Compare DEPENDENCIES.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:53.925914243-08:00","updated_at":"2025-12-03T20:19:28.665641809-08:00","closed_at":"2025-12-03T20:19:28.665641809-08:00","dependencies":[{"issue_id":"skills-lie","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:53.9275694-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-lvg","title":"Compare ISSUE_CREATION.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:54.609282051-08:00","updated_at":"2025-12-03T20:19:29.134966356-08:00","closed_at":"2025-12-03T20:19:29.134966356-08:00","dependencies":[{"issue_id":"skills-lvg","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:54.610717055-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-lzk","title":"Simplify branch name generation in create-new-feature.sh","description":"File: .specify/scripts/bash/create-new-feature.sh (lines 137-181)\n\nIssues:\n- 3 nested loops/conditionals\n- Complex string transformations with multiple sed operations\n- Stop-words list and filtering logic hard to maintain\n\nFix:\n- Extract to separate function\n- Simplify word filtering logic\n- Add input validation\n\nSeverity: MEDIUM","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:14.286951249-05:00","updated_at":"2025-12-24T02:51:14.286951249-05:00"}
{"id":"skills-m21","title":"Apply niri-window-capture code review recommendations","description":"CODE-REVIEW-niri-window-capture.md identifies action items: add dependency checks to scripts, improve error handling for niri failures, add screenshot directory validation, implement rate limiting. See High/Medium priority sections.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:24.648846875-08:00","updated_at":"2025-11-30T11:58:24.648846875-08:00"}
{"id":"skills-mx3","title":"spec-review: Define consensus thresholds and decision rules","description":"'Use judgment' for mixed results leads to inconsistent decisions.\n\nDefine:\n- What constitutes consensus (2/3? unanimous?)\n- How to handle NEUTRAL votes\n- Tie-break rules\n- When human override is acceptable and how to document it","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-15T00:23:24.121175736-08:00","updated_at":"2025-12-15T13:58:04.339283238-08:00","closed_at":"2025-12-15T13:58:04.339283238-08:00"}
{"id":"skills-oes","title":"Define skill manifest format","description":"Skills need to declare their interface so beads can validate.\n\nManifest should include:\n- Required inputs (args, env vars)\n- Optional inputs with defaults\n- Expected outputs (files, artifacts)\n- Preconditions (tools, repos, permissions)\n\nLocation: SKILL.md frontmatter or separate manifest.yaml\n\nEnables: Proto validation before spawning, better error messages.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T19:49:30.673372413-05:00","updated_at":"2025-12-23T20:55:04.427620449-05:00","closed_at":"2025-12-23T20:55:04.427620449-05:00","close_reason":"ADRs revised with orch consensus feedback"}
{"id":"skills-p2o","title":"Refactor update-agent-context.sh: array+loop for agents","description":"File: .specify/scripts/bash/update-agent-context.sh (772 lines)\n\nIssues:\n- 12 nearly-identical if-blocks in update_all_existing_agents() (lines 632-701)\n- Should be refactored into loop with array of agent configurations\n- Current pattern repeats: if [[ -f \"$CLAUDE_FILE\" ]]; then update_agent_file...\n\nFix:\n- Create AGENTS array with (file, name, format) tuples\n- Replace 12 if-blocks with single for loop\n- Estimated reduction: 60 lines\n\nSeverity: HIGH","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-24T02:50:57.385820971-05:00","updated_at":"2025-12-24T02:50:57.385820971-05:00"}
{"id":"skills-p3v","title":"Cross-language FFI wormholes via LSP","description":"Bridge FFI boundaries where standard LSPs go blind:\n- Rust extern C → clangd lookup\n- Go CGO → match C symbols\n- Python FFI → trace bindings\n\nGenerate synthetic go-to-definition maps. When hovering over C call in Rust, intercept hover request, query C LSP, inject C definition into Rust tooltip.\n\nEnables seamless polyglot navigation.","status":"open","priority":4,"issue_type":"feature","created_at":"2025-12-24T02:29:57.597602745-05:00","updated_at":"2025-12-24T02:29:57.597602745-05:00"}
{"id":"skills-pdg","title":"Enable AT-SPI for UI tree access","description":"## Findings\n\nAT-SPI (Assistive Technology Service Provider Interface) provides semantic UI tree access - buttons, labels, text fields, their states and coordinates.\n\n### Current state\n- AT-SPI is **disabled** on this NixOS system\n- Environment has `NO_AT_BRIDGE=1` and `GTK_A11Y=none`\n- No apps are exposing accessibility info\n\n### To enable\n```nix\nservices.gnome.at-spi2-core.enable = true;\n```\n\nThen rebuild and re-login (apps must start fresh to register with bus).\n\n### App support\n- **GTK apps**: Should work automatically\n- **Qt apps**: Need `QT_LINUX_ACCESSIBILITY_ALWAYS_ON=1` env var\n- **Electron**: Varies by app, often poor support\n\n### Trade-offs\n- Adds runtime overhead to all GTK/Qt apps\n- May want as boot-time option rather than always-on\n- Only useful for automation/accessibility use cases\n\n### Tools once enabled\n- `python3-pyatspi` / `dogtail` for querying UI tree\n- `accerciser` for visual inspection of accessibility tree\n\n### Next steps\n1. Add NixOS option (possibly as boot-time toggle)\n2. Test with common apps (Firefox, terminals, etc.)\n3. Build skill to query UI elements\n\n## Related\nParent epic: skills-kg7 (Desktop automation for Wayland/niri)","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-17T13:59:55.799402507-08:00","updated_at":"2025-12-17T13:59:55.799402507-08:00"}
{"id":"skills-pu4","title":"Clean up stale beads.left.jsonl merge artifact","description":"bd doctor flagged multiple JSONL files. beads.left.jsonl is empty merge artifact that should be removed: git rm .beads/beads.left.jsonl","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:33.292221449-08:00","updated_at":"2025-11-30T12:37:49.916795223-08:00","closed_at":"2025-11-30T12:37:49.916795223-08:00"}
{"id":"skills-qeh","title":"Add README.md for web-research skill","description":"web-research skill has SKILL.md and scripts but no README.md. AGENTS.md says README.md is for humans, contains installation instructions, usage examples, prerequisites.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:14.475647113-08:00","updated_at":"2025-11-30T12:00:30.309340468-08:00","dependencies":[{"issue_id":"skills-qeh","depends_on_id":"skills-vb5","type":"blocks","created_at":"2025-11-30T12:01:30.278784381-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-r5c","title":"Extract shared logging library from scripts","description":"Duplicated logging/color functions across multiple scripts:\n- bin/deploy-skill.sh\n- skills/tufte-press/scripts/generate-and-build.sh\n- Other .specify scripts\n\nPattern repeated:\n- info(), warn(), error() functions\n- Color definitions (RED, GREEN, etc.)\n- Same 15-20 lines in each file\n\nFix:\n- Create scripts/common-logging.sh\n- Source from all scripts that need it\n- Estimated reduction: 30+ lines of duplication\n\nSeverity: MEDIUM","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-24T02:50:58.324852578-05:00","updated_at":"2025-12-24T02:50:58.324852578-05:00"}
{"id":"skills-rex","title":"Test integration on worklog skill","description":"Use worklog skill as first real test case:\n- Create wisp for worklog execution\n- Capture execution trace\n- Test squash → digest\n- Validate trace format captures enough info for replay\n\nMigrated from dotfiles-drs.","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-23T19:21:18.75525644-05:00","updated_at":"2025-12-23T19:21:18.75525644-05:00","dependencies":[{"issue_id":"skills-rex","depends_on_id":"skills-3em","type":"blocks","created_at":"2025-12-23T19:22:00.34922734-05:00","created_by":"dan"}]}
{"id":"skills-rpf","title":"Implement playwright-visit skill for browser automation","description":"## Overview\nBrowser automation skill using Playwright to visit web pages, take screenshots, and extract content.\n\n## Key Findings (from dotfiles investigation)\n\n### Working Setup\n- Use `python312Packages.playwright` from nixpkgs (handles Node driver binary patching for NixOS)\n- Use `executable_path='/run/current-system/sw/bin/chromium'` to use system chromium\n- No `playwright install` needed - no browser binary downloads\n\n### Profile Behavior\n- Fresh/blank profile every launch by default\n- No cookies, history, or logins from user's browser\n- Can persist state with `storage_state` parameter if needed\n\n### Example Code\n```python\nfrom playwright.sync_api import sync_playwright\n\nwith sync_playwright() as p:\n browser = p.chromium.launch(\n executable_path='/run/current-system/sw/bin/chromium',\n headless=True\n )\n page = browser.new_page()\n page.goto('https://example.com')\n print(page.title())\n browser.close()\n```\n\n### Why Not uv/pip?\n- Playwright pip package bundles a Node.js driver binary\n- NixOS can't run dynamically linked executables without patching\n- nixpkgs playwright handles this properly\n\n## Implementation Plan\n1. Create `skills/playwright-visit/` directory\n2. Add flake.nix with devShell providing playwright\n3. Create CLI script with subcommands:\n - `screenshot \u003curl\u003e \u003coutput.png\u003e` - capture page\n - `text \u003curl\u003e` - extract text content \n - `html \u003curl\u003e` - get rendered HTML\n - `pdf \u003curl\u003e \u003coutput.pdf\u003e` - save as PDF\n4. Create skill definition for Claude Code integration\n5. Document usage in skill README\n\n## Dependencies\n- nixpkgs python312Packages.playwright\n- System chromium (already in dotfiles)\n\n## Related\n- dotfiles issue dotfiles-m09 (playwright skill request)","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-16T16:02:28.577381007-08:00","updated_at":"2025-12-16T16:02:28.577381007-08:00"}
{"id":"skills-s92","title":"Add tests for config injection (deploy-skill.sh)","description":"File: bin/deploy-skill.sh (lines 112-137)\n\nCritical logic with NO test coverage:\n- Idempotency (running twice should be safe)\n- Correct brace matching in Nix\n- Syntax validity of injected config\n- Rollback on failure\n\nRisk: MEDIUM-HIGH - can break dotfiles Nix config\n\nFix:\n- Test idempotent injection\n- Validate Nix syntax after injection\n- Test with malformed input\n\nSeverity: MEDIUM","status":"open","priority":3,"issue_type":"task","created_at":"2025-12-24T02:51:01.314513824-05:00","updated_at":"2025-12-24T02:51:01.314513824-05:00"}
{"id":"skills-ty7","title":"Define trace levels (audit vs debug)","description":"Two trace levels to manage noise vs utility:\n\n1. Audit trace (minimal, safe, always on):\n - skill id/ref, start/end\n - high-level checkpoints\n - artifact hashes/paths\n - exit status\n\n2. Debug trace (opt-in, verbose):\n - tool calls with args\n - stdout/stderr snippets\n - expanded inputs\n - timing details\n\nConsider OpenTelemetry span model as reference.\nGPT proposed this; Gemini focused on rotation/caps instead.","status":"in_progress","priority":3,"issue_type":"task","created_at":"2025-12-23T19:49:48.514684945-05:00","updated_at":"2025-12-23T20:05:23.244193346-05:00"}
{"id":"skills-u3d","title":"Define skill trigger conditions","description":"How does an agent know WHEN to apply a skill/checklist?\n\nOptions:\n- frontmatter triggers: field with patterns\n- File-based detection\n- Agent judgment from description\n- Beads hooks on state transitions\n- LLM-based pattern detection","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-23T17:59:09.69468767-05:00","updated_at":"2025-12-23T17:59:09.69468767-05:00"}
{"id":"skills-uz4","title":"Compare RESUMABILITY.md with upstream","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-03T20:15:54.897754095-08:00","updated_at":"2025-12-03T20:19:29.384645842-08:00","closed_at":"2025-12-03T20:19:29.384645842-08:00","dependencies":[{"issue_id":"skills-uz4","depends_on_id":"skills-ebh","type":"discovered-from","created_at":"2025-12-03T20:15:54.899671178-08:00","created_by":"daemon","metadata":"{}"}]}
{"id":"skills-vb5","title":"Resolve web search design questions","description":"web_search_brainstorm.md has unanswered design questions: single smart skill vs explicit flags, specific sources priority, raw links vs summaries. Need user input to finalize web-search/web-research direction.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-30T11:58:33.482270742-08:00","updated_at":"2025-11-30T11:58:33.482270742-08:00"}
{"id":"skills-vjm","title":"Refactor update-agent-context.sh: reduce nesting depth","description":"File: .specify/scripts/bash/update-agent-context.sh\n\nIssues:\n- update_existing_agent_file() has 4-level deep nesting (lines 360-499)\n- State machine with multiple variables: in_tech_section, in_changes_section, tech_entries_added\n- 70+ lines of while loop processing\n\nFix:\n- Extract file processing to separate function\n- Consider sed/awk for line-based transformations\n- Use guard clauses to reduce nesting\n\nSeverity: HIGH","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-24T02:50:57.874439288-05:00","updated_at":"2025-12-24T02:50:57.874439288-05:00"}
{"id":"skills-vpy","title":"Design checklist support for skills","description":"Design how checklists fit into the skills system.\n\nQuestions:\n- Skill-as-checklist (SKILL.md with just items, no scripts)?\n- Separate checklist format?\n- Trigger conditions in frontmatter?\n- Integration with bd audit for tracking?\n\nTiers considered:\n1. AGENTS.md (simplest, no tracking)\n2. Skill-as-checklist (deployed, invokable)\n3. Proto (full tracking, overhead)","status":"in_progress","priority":2,"issue_type":"task","created_at":"2025-12-23T17:59:09.569427412-05:00","updated_at":"2025-12-23T17:59:25.865326103-05:00"}
{"id":"skills-wm9","title":"Research Steve Yegge's orchestration work","description":"Steve Yegge is working on something new related to AI orchestration. Research what it is and how it might inform our skills+molecules integration design.\n\nBlocks: skills-hin (ADR finalization)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-24T02:41:47.848905848-05:00","updated_at":"2025-12-24T02:42:24.40239935-05:00","closed_at":"2025-12-24T02:42:24.40239935-05:00","close_reason":"Not needed - just parking the ADR work"}
{"id":"skills-x2l","title":"Investigate hooks for parallel orch queries","description":"When using orch skill, it would be useful to spin off multiple model queries in parallel automatically (e.g., gemini + gpt simultaneously). Explore if Claude Code hooks can trigger parallel background processes when the orch skill is invoked.","status":"open","priority":2,"issue_type":"feature","created_at":"2025-12-06T19:29:00.165752425-08:00","updated_at":"2025-12-06T19:29:00.165752425-08:00"}
{"id":"skills-x33","title":"Add tests for branch name generation","description":"File: .specify/scripts/bash/create-new-feature.sh (lines 137-181)\n\nCritical logic with NO test coverage:\n- Word filtering with stop-words\n- Acronym detection\n- Unicode/special character handling\n- Max length boundary (244 bytes)\n- Empty/single-word descriptions\n\nRisk: HIGH - affects all branch creation\n\nFix:\n- Create test suite with edge cases\n- Test stop-word filtering accuracy\n- Test boundary conditions\n\nSeverity: HIGH","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-24T02:51:00.311664646-05:00","updated_at":"2025-12-24T02:51:00.311664646-05:00"}